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Nathanaël Aubert-Kato Lecturer at the department of information sciences, Ochanomizu University home publications teaching software Lab Hello Research interests: Molecular programming; Evolutionary optimization; Artificial life My name is Nathanaël Aubert-Kato. I am currently a lecturer at the department of Information Sciences, from the Ochanomizu University (Tokyo, Japan). My research focus is on modeling, simulating, and designing molecular programming systems. My long term research goal is to provide methods to develop and program DNA computing-based smart materials. I follow two research directions: Bottom-up: considering a specific set of interactions among molecules, create the right model and simulation tools, leading to the discovery of emergent properties Approach: mass-action kinetics; ODE/PDE; data analysis Top-down: considering a target abstract behavior, define modules or lower-level behaviors that are required and can be implemented more easily. Approach: agent-based modeling; evolutionary strategies contact: naubertkato at is dot ocha dot ac dot jp Computing with molecules Why molecular programming? Molecular programming is a computing paradigm that relies on chemical reactions among molecules to encode operations. DNA is an excellent material as reactions are strongly dependent on sequence through Watson-Crick base-pairing (A pairs with T, C with G, only complementary sequences can interact). This gives us the possibility to abstract and simplify behaviors to focus on high-level mechanics (see above Figure). In recent years, the field has flourished, with both theoretical proofs of Turing equivalence [Seelig et al., 2006] and real-life, in-vitro implementations (see for instance the review from [Padirac et al., 2013]). Upcoming conferences/events Jul15-19 GECCO2023, Lisbone, Portugal The Genetic and Evolutionary Computation Conference Jul24-28 ALIFE2023, Sapporo, Japan The 2023 Conference on Artificial Life Sep11-15 DNA 29, Sendai, Japan The 29th International Conference on DNA Computing and Molecular Programming Design by TEMPLATED.

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